CDS

Accession Number TCMCG007C40976
gbkey CDS
Protein Id XP_033130579.1
Location join(451920..451987,452063..452762,452918..452992,453064..453129,453229..453294,453551..453892,453973..454056)
Gene LOC117126501
GeneID 117126501
Organism Brassica rapa

Protein

Length 466aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033274688.1
Definition transcription factor PIF1 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description transcription factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K16189        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006778        [VIEW IN EMBL-EBI]
GO:0006779        [VIEW IN EMBL-EBI]
GO:0006783        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009739        [VIEW IN EMBL-EBI]
GO:0009740        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009959        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010029        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010099        [VIEW IN EMBL-EBI]
GO:0010100        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010187        [VIEW IN EMBL-EBI]
GO:0010313        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010476        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0015994        [VIEW IN EMBL-EBI]
GO:0015995        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0033013        [VIEW IN EMBL-EBI]
GO:0033014        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042168        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071370        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1900140        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000030        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGATTATGTCAACGCTAACACAAACTCTTCTTCTTCAAATCTTCCTAGAAAACCCATCATGTAAAGGGGAAGAAGAAGATGGTGATCTCATGGAGCTTCTATGGCACAACGGTCAGGTGGTTCTCCAAAATCAAAGACCAAACACCAAGAAACAACCTCCTTCTTCTTCTTCTTCCTCTGCTCCTCCCCCGCCGTTGGATCATAATCTCTTCATCCAGGAAGACGAAATGTCCTCATGGCTTCATTATCCTCTCCGCGAAGATGATTTCTGCTCAGATCTTTTCTTCCCCGCCGCGCCGTCATCTGAGAGACAGGCCTCGAATCAGGTCACCTCCGCCAGGCCACCGGTACCTTCCACTGTGAGGCCGCCGGAACCGTCGTCTATGAGGCCACCGGCACCGTCGTCTGTGAAGCCTCCGGTACGGAACTTCATGAACTTCTCGAGGCTGAGAGGGGATTTCACCGGCAGAGGAGAATCTGGACCGTCGACTGTGAGAGAATCGGCGAAAGTAAACCCTAGCGCCACACCGGCGTCGTCGGCAGCGAGGGAATCCGATTTAGGATCCAGATCCGCCGTGGATGGAGGCGGGGCGTATACTGTGGGAGATAATCGGAAGGGAAAGGCAGTGGTGACGACGGAGCCGGCGAGAGAGAATCAAGGTACATCGTCTTCTGTTGCGTCGAAGAGTGAAATCGAGACGATCGTCGATGAGAGGAAACGAAAGGAGAGAGAAGCCATTGACGAGACTGAGTGCCGGAACGAGGAGGCTAAACAAGGACGTGGATCATCATCGACTAAGAGATCTCGTGCTGCTGAAGTTCATAATCTCTCTGAAAGGAAACGGAGAGATAGGATCAACGAGAGGATGAAAGCTCTTCAAGAACTCATTCCTCGCTGCAACAAGTCAGATAAAGCTTCAATGCTTGATGAAGCTATTGAGTACATGAAATCTCTCCAGCTTCAAATACAGATGATGTCAATGGGATGCGGTATGATGCCGATGATGTACACCGGTATGCAACAGTACATGCCTCACATGGCTATGGGAATGGGAATGGAGATGGGTATGAACAGGCCTCCTCCTCCTCCTCCTCCGTTCATGCCATTTCCAAATATGTTAGCTTCTCAAAGACCTTTACCTCCACAGACTCGTATGGGCGGCTACCCTCCTGTTCAAGCTTCTGATCCATCAAGAGTATATGGATCAAACCAGCAGTTTGATCCAAACTCGAGCCAGGCTCAGTTTTCAGCTTACATGGATCCATTTCAGCAATTCCGCAGTCTCCACCCCAGCCAACCACCTCAGTTTCAGAATCAAGCAGCATCGTACCCAAGTTCAAGCAGGGTAAGTAGTAGCAAGGAATCCGAGGATCATGGAAACCAAACAACAAGTTGA
Protein:  
MMIMSTLTQTLLLQIFLENPSCKGEEEDGDLMELLWHNGQVVLQNQRPNTKKQPPSSSSSSAPPPPLDHNLFIQEDEMSSWLHYPLREDDFCSDLFFPAAPSSERQASNQVTSARPPVPSTVRPPEPSSMRPPAPSSVKPPVRNFMNFSRLRGDFTGRGESGPSTVRESAKVNPSATPASSAARESDLGSRSAVDGGGAYTVGDNRKGKAVVTTEPARENQGTSSSVASKSEIETIVDERKRKEREAIDETECRNEEAKQGRGSSSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYTGMQQYMPHMAMGMGMEMGMNRPPPPPPPFMPFPNMLASQRPLPPQTRMGGYPPVQASDPSRVYGSNQQFDPNSSQAQFSAYMDPFQQFRSLHPSQPPQFQNQAASYPSSSRVSSSKESEDHGNQTTS